Class jalview.io.CrossRef2xmlTests

all > jalview.io > CrossRef2xmlTests

tests

failures

ignored

7.674s

duration

100%

successful

Tests
Standard output
Standard error

Tests

Test	Duration	Result
openCrossrefsForEnsemblTwice	7.674s	passed

Standard output

File format identified as Jalview
registry.getSupportedServices: [MSAprobsWS, DisemblWS, TcoffeeWS, RNAalifoldWS, MafftWS, IUPredWS, GlobPlotWS, ProbconsWS, AAConWS, JronnWS, ClustalWS, MuscleWS, ClustalOWS, GLprobsWS]
Attempting to connect with MafftWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5
Attempting to connect with MuscleWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6
Attempting to connect with ClustalWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4
Attempting to connect with ClustalOWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81
Attempting to connect with TcoffeeWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65
Attempting to connect with ProbconsWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b
Attempting to connect with MSAprobsWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15
Attempting to connect with GLprobsWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96
Attempting to connect with AAConWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d
Attempting to connect with RNAalifoldWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950
Attempting to connect with JronnWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@534185e
Attempting to connect with DisemblWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c
Attempting to connect with GlobPlotWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3
Attempting to connect with IUPredWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@21849294

Standard error

DEBUG - (Re)-Initialising the discovery URL list.
DEBUG - Setting default services
DEBUG - A MsaWS service called Muscle Multiple Protein Sequence Alignment exists at http://www.compbio.dundee.ac.uk/JalviewWS/services/MuscleWS

DEBUG - A MsaWS service called MAFFT Multiple Sequence Alignment exists at http://www.compbio.dundee.ac.uk/JalviewWS/services/MafftWS

DEBUG - A MsaWS service called ClustalW Multiple Sequence Alignment exists at http://www.compbio.dundee.ac.uk/JalviewWS/services/ClustalWS

DEBUG - A SecStrPred service called JPred Secondary Structure Prediction exists at http://www.compbio.dundee.ac.uk/JalviewWS/services/jpred

DEBUG - No service endpoints to use for service discovery.
DEBUG - Constructing news reader.
DEBUG - Not enabling Google Tracking.
DEBUG - Filechooser init thread finished.
DEBUG - Aborting 1 JABAWS discovery threads.
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@2c0d7367, jalview.ws.jws2.jabaws2.Jws2Instance@f02c5f7, jalview.ws.jws2.jabaws2.Jws2Instance@8539e08, jalview.ws.jws2.jabaws2.Jws2Instance@4639e015, jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5, jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e, jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9, jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf, jalview.ws.jws2.jabaws2.Jws2Instance@1491b236, jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb, jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f, jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557, jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4, jalview.ws.jws2.jabaws2.Jws2Instance@750ee1d7]
DEBUG - Old discovery thread has finished.
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
DEBUG - Firing service changed event for []
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DEBUG - Exception downloading identifiers.org datahttps://www.jalview.org/services/identifiers
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DEBUG - Scanning news items: newsnew=false and lastDate is Sun Jul 02 11:12:10 CEST 2023
DEBUG - Completed construction of reader.
DEBUG - Completed news thread.
Jul 02, 2023 10:12:11 AM compbio.ws.client.Jws2Client connectToRegistry
INFO: Connected to RegistryWS successfully!
Jul 02, 2023 10:12:11 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
Jul 02, 2023 10:12:11 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
Jul 02, 2023 10:12:12 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
Jul 02, 2023 10:12:12 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
Jul 02, 2023 10:12:12 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
Jul 02, 2023 10:12:13 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
Jul 02, 2023 10:12:13 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
Jul 02, 2023 10:12:13 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
Jul 02, 2023 10:12:13 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
Jul 02, 2023 10:12:14 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
Jul 02, 2023 10:12:14 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
DEBUG - Created new dataset ds01 for alignment 863941657
Jul 02, 2023 10:12:14 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
DEBUG - Setting viewport's sequence set id : 40932922531100
DEBUG - Setting viewport's view id : 409329225.45476459231100
Jul 02, 2023 10:12:15 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
Warning - overwriting a sequenceSetId for a viewport!
Jul 02, 2023 10:12:15 AM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
Rebuild WS Menu for service change
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
Rebuild WS Menu for service change
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
Rebuild WS Menu for service change
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
Rebuild WS Menu for service change
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
DEBUG - Firing service changed event for [jalview.ws.jws2.jabaws2.Jws2Instance@765e6b81, jalview.ws.jws2.jabaws2.Jws2Instance@6a053a15, jalview.ws.jws2.jabaws2.Jws2Instance@7f23db96, jalview.ws.jws2.jabaws2.Jws2Instance@4e2404d4, jalview.ws.jws2.jabaws2.Jws2Instance@114c4fd6, jalview.ws.jws2.jabaws2.Jws2Instance@2e20ecb5, jalview.ws.jws2.jabaws2.Jws2Instance@131cc72b, jalview.ws.jws2.jabaws2.Jws2Instance@3f0dae65, jalview.ws.jws2.jabaws2.Jws2Instance@1590ef7d, jalview.ws.jws2.jabaws2.Jws2Instance@e1af11c, jalview.ws.jws2.jabaws2.Jws2Instance@4a73a5e3, jalview.ws.jws2.jabaws2.Jws2Instance@21849294, jalview.ws.jws2.jabaws2.Jws2Instance@534185e, jalview.ws.jws2.jabaws2.Jws2Instance@cd4e950]
Rebuild WS Menu for service change
Rebuild WS Menu for service change
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Rebuild WS Menu for service change
Rebuild WS Menu for service change
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Rebuild WS Menu for service change
Rebuild WS Menu for service change
Rebuild WS Menu for service change
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DEBUG - Scanning news items: newsnew=false and lastDate is Sun Jul 02 11:12:10 CEST 2023
DEBUG - Saved last read date as 2 Jul 2023, 11:12:10
DEBUG - Scanning news items: newsnew=false and lastDate is Sun Jul 02 11:12:10 CEST 2023
DEBUG - Saved last read date as 2 Jul 2023, 11:12:10
DEBUG - Scanning news items: newsnew=false and lastDate is Sun Jul 02 11:12:10 CEST 2023
DEBUG - Saved last read date as 2 Jul 2023, 11:12:10